Fitness data for PP_0513 in Pseudomonas putida KT2440

DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP
SEED: Ribonucleotide reductase transcriptional regulator NrdR
KEGG: transcriptional repressor NrdR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -6.3 -2.8 compare
nitrogen source NAG (N); with MOPS -6.0 -2.4 compare
nitrogen source NAG (N); with MOPS -5.9 -2.3 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -5.5 -3.3 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -4.1 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.9 -2.5 compare
pH pH 4 -3.7 -2.5 compare
pH Growth at pH8 and (C) D-Glucose -3.7 -2.6 compare
carbon source D-Glucose (C) -3.4 -3.2 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -2.8 -1.9 compare
carbon source Nonanoic (C) -2.7 -2.5 compare
nitrogen source NAG (N) -2.7 -3.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -2.5 -1.8 compare
carbon source Trisodium citrate (C) -2.5 -2.1 compare
pH Growth at pH7 and (C) D-Glucose -2.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.4 -2.3 compare
microaerobic m9 microaerobic M9 -2.2 -2.3 compare
stress R2A with Fusaric 480 ug/mL -2.2 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.2 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.1 -1.7 compare