Fitness data for PP_0490 in Pseudomonas putida KT2440

formate dehydrogenase-O, beta subunit
KEGG: formate dehydrogenase, beta subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0 -3.2 compare
pH Growth at pH7 and (C) D-Glucose -0.9 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.0 compare
pH pH 9 -0.7 -1.8 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.3 compare
stress R2A with Fusaric 480 ug/mL -0.6 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.3 compare
temperature shift Temperature shift 30_to_25 -0.5 -1.7 compare
nitrogen source Urea (N) +0.6 +1.9 compare
carbon source Valerolactone (C) +0.6 +2.2 compare
phage P. put PUT 10 MOI 0.1 +0.6 +2.8 compare
phage P. putida South MOI 0.1 +0.6 +2.5 compare
carbon source 1,3-Butandiol (C) +0.7 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.5 compare
phage P. putida PUT 7 MOI 1 +0.8 +2.9 compare
nitrogen source 2,6-diaminopimelic (N) +1.1 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.0 compare