Fitness data for PP_0487 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Putative membrane protein precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.8 -2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.7 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.6 compare
carbon source Ethyl decanoate and D-Glucose (C)s -0.6 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.1 compare
carbon source acetate (C) -0.5 -1.6 compare
pH pH 6 -0.5 -2.4 compare
carbon source L-Lysine (C) -0.5 -2.1 compare
nitrogen source Urea (N) +0.5 +1.6 compare
phage P. putida South MOI 10 +0.5 +1.8 compare
stress Growth with Chloride 500 mM +0.5 +2.4 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.5 compare
phage P. putida Sci Big MOI 0.1 +0.5 +2.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.8 compare
phage P. putida Missley MOI 0.1 +0.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.5 compare