Fitness data for PP_0486 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source DL-3-Hydroxyisobutyric (C) -1.0 -6.4 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.9 -5.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.4 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.1 compare
carbon source 2-methyl-1-butanol (C) -0.3 -2.5 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -1.8 compare
no stress control Growth with no stress +0.3 +1.5 compare
pH Growth at pH8 and (C) D-Glucose +0.3 +1.5 compare
carbon source Octanoic (C) +0.3 +2.1 compare
nitrogen source Ammonium chloride (N) +0.3 +1.7 compare
phage P. putida Sci Big MOI 0.1 +0.3 +1.7 compare
phage P. putida compost MOI 0.1 +0.3 +2.5 compare
carbon source L-Phenylalanine 5 mM (C) +0.4 +2.4 compare
phage P. putida compost MOI 0.1 +0.4 +2.9 compare
phage P. putida PUT 7 MOI 1 +0.4 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.9 compare
phage P. putida Missley MOI 0.1 +0.6 +2.8 compare