Fitness data for PP_0414 in Pseudomonas putida KT2440

Polyamine ABC transporter, permease protein
SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
carbon source Beta-alanine (C) -4.9 -4.4 compare
carbon source Beta-alanine (C) -4.8 -5.9 compare
carbon source 4-Aminobutyric 10 mM (C) -3.7 -3.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.3 -3.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.2 -5.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.5 -4.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.4 -3.1 compare
carbon source 4-Hydroxyvalerate (C) (40mM) -2.1 -5.5 compare
carbon source Delta-Undecalactone (C) -2.1 -7.3 compare
carbon source ferulate (C); with MOPS -1.8 -3.6 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -3.6 compare
carbon source ferulate (C); with MOPS -1.5 -2.4 compare
nitrogen source Beta-alanine (N) -1.5 -7.4 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -1.5 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.5 -4.3 compare
carbon source DL-3-Hydroxybutyric (C) -1.5 -4.8 compare
carbon source Delta-Undecalactone (C) -1.5 -3.6 compare
carbon source Delta-Decalactone (C) -1.4 -4.8 compare
pH Valerolactone (C) pH 6.5 -1.4 -2.9 compare
temperature shift Temperature shift 10_to_30 +1.4 +5.5 compare