Fitness data for PP_0401 in Pseudomonas putida KT2440

Ribosomal RNA small subunit methyltransferase A
SEED: SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182)
KEGG: 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
stress R2A with Fusaric 480 ug/mL -7.4 -5.1 compare
temperature shift Temperature shift 30_to_4 -5.4 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -5.4 -3.4 compare
pH Growth at pH6 and (C) Trisodium citrate -5.1 -3.5 compare
micoeukaryotes C.elegans, mixed culture-1 -3.7 -5.7 compare
micoeukaryotes C.elegans, mixed culture-2 -3.3 -3.6 compare
carbon source Oleic (C) -3.2 -3.8 compare
temperature shift Temperature shift 30_to_4 -3.0 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.9 -2.6 compare
carbon source Tween 20 (C) -2.8 -3.1 compare
phage P. putida South MOI 10 -2.8 -3.1 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -2.8 -4.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.7 -5.1 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.6 -3.1 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -2.6 -4.3 compare
temperature shift Temperature shift 30_to_10 -2.5 -3.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.5 -5.1 compare
carbon source L-Leucine (C) -2.4 -2.3 compare
lb outgrowth control more dilute start LB outgrowth control more dilute start -2.4 -3.6 compare
phage P. putida South MOI 0.1 -2.3 -3.3 compare