Fitness data for PP_0352 in Pseudomonas putida KT2440

RNA polymerase sigma-70 factor, ECF subfamily
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source Myristic (C) -1.7 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -1.6 -2.1 compare
carbon source ferulate (C); with MOPS -1.4 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -1.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -3.2 compare
nitrogen source D-2-Aminobutyric (N) -1.2 -1.8 compare
phage P. putida PUT10 MOI 10 -1.1 -2.6 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -1.7 compare
stress Geraniol 1 vol% -0.9 -2.7 compare
phage P. putida South MOI 1 -0.8 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.8 -1.4 compare
carbon source ferulate (C); with MOPS +0.8 +1.3 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.9 +2.2 compare
pH pH 9 +0.9 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.8 compare
pH pH 6 +1.0 +2.2 compare
carbon source acetate (C) +1.1 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.0 compare
carbon source carbon source 4-vinylphenol 0.01 mM +1.1 +4.3 compare
nitrogen source 2,6-diaminopimelic (N) +1.3 +1.9 compare