Fitness data for PP_0336 in Pseudomonas putida KT2440

Peptide methionine sulfoxide reductase MsrA
SEED: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
KEGG: peptide-methionine (S)-S-oxide reductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -4.2 compare
pH Valerolactone (C) pH 6.5 -0.9 -3.1 compare
temperature LB_noSalt 37C -0.7 -4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -2.9 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.6 -2.6 compare
nitrogen source Urea (N); with MOPS -0.6 -2.1 compare
temperature LB_noSalt 37C -0.6 -4.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.6 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.8 compare
temperature shift Temperature shift 30_to_25 -0.5 -2.4 compare
stress R2A with Fusaric 480 ug/mL -0.5 -2.3 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.5 -2.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.1 compare
carbon source D-Glucose (C); with MOPS -0.5 -1.6 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.0 compare
pH Growth at pH8 and (C) D-Glucose +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.9 compare
nitrogen source NAG (N); with MOPS +0.6 +2.1 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +1.7 compare