Fitness data for PP_0304 in Pseudomonas putida KT2440

Carnitine uptake ABC transporter, periplasmic component
KEGG: glycine betaine/proline transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Carnitine Hydrochloride (N) -2.8 -5.8 compare
nitrogen source Carnitine Hydrochloride (N) -2.8 -8.6 compare
supernatant Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x -0.8 -3.2 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.6 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -1.4 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.1 compare
nitrogen source NAG (N); with MOPS -0.5 -0.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.2 compare
stress R2A with Fusaric 240 ug/mL +0.5 +1.3 compare
nitrogen source nitrate (N) +0.6 +2.1 compare
pH D-Glucose (C) pH 6.5 +0.6 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.7 compare
pH pH 9 +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +3.2 compare