Fitness data for PP_0286 in Pseudomonas putida KT2440

adenine glycosylase
SEED: A/G-specific adenine glycosylase (EC 3.2.2.-)
KEGG: A/G-specific adenine glycosylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage PUT 8 MOI 1 -1.0 -3.1 compare
phage PUT8 MOI 0.1 -0.7 -3.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7 -2.2 compare
temperature Growth at 30C; with MOPS -0.6 -2.2 compare
carbon source 3-methyl-1-butanol (C) -0.6 -3.2 compare
phage P. putida South MOI 1 -0.6 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.4 compare
phage P. put South MOI 0.1 -0.5 -2.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.5 -2.7 compare
phage P. put PUT 10 MOI 0.1 -0.5 -2.5 compare
phage P. putida PUT10 MOI 1 -0.5 -2.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -1.6 compare
carbon source Lignin Monomers (C) +0.5 +2.2 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +1.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
carbon source Lignin Monomers (C) +0.6 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.2 compare