Fitness data for PP_0272 in Pseudomonas putida KT2440

Outer membrane ferric siderophore receptor
SEED: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source D-Glucose (C) -0.5 -2.7 compare
carbon source Lignin Monomers (C) -0.3 -2.5 compare
carbon source BC Lignin Sorghum 20 vol% (C) -0.3 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.0 compare
micoeukaryotes C.elegans, mixed culture-2 -0.3 -1.8 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -1.5 compare
stress Growth with Chloride 200 mM -0.3 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.2 -1.7 compare
pH Growth at pH6 and (C) D-Glucose +0.2 +1.3 compare
carbon source ferulate (C); with MOPS +0.2 +1.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.3 +1.7 compare
carbon source Oleic (C) +0.3 +2.0 compare
nitrogen source Ammonium chloride (N) +0.3 +1.6 compare
carbon source Octanoic (C) +0.3 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.3 compare