Fitness data for PP_0258 in Pseudomonas putida KT2440

regulator of murein cross-linking
SEED: FIG00954962: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -2.0 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.9 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -1.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.4 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.2 -1.8 compare
phage P. putida Missley MOI 0.1 -1.2 -2.4 compare
carbon source acetate (C) -1.2 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -2.3 compare
nitrogen source Urea (N) -1.1 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.0 -2.9 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -2.5 compare
temperature Growth at 25C -1.0 -1.1 compare
carbon source 3-Hydroxydecanoic (C) +1.0 +1.8 compare
nitrogen source 2,6-diaminopimelic (N) +1.1 +2.1 compare
nitrogen source nitrogen source nitrite 1mM +1.1 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.4 compare