Fitness data for PP_0249 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Propandiamine (N) -1.0 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -3.5 compare
carbon source D-Glucose (C) -0.8 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.7 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.6 -2.5 compare
pH pH 7 -0.6 -2.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.6 -1.5 compare
pH pH 5 -0.5 -1.7 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -1.0 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.4 compare
temperature Growth at 30C; with MOPS +0.5 +2.0 compare
nitrogen source Urea (N) +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare