Fitness data for PP_0227 in Pseudomonas putida KT2440

periplasmic cystine-binding protein
SEED: Cystine ABC transporter, periplasmic cystine-binding protein FliY
KEGG: cystine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.9 -6.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -6.8 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -5.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -3.2 compare
nitrogen source Ammonium chloride (N) -0.5 -1.7 compare
nitrogen source L-Cysteine (N) -0.5 -3.4 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.5 -2.0 compare
nitrogen source L-Cysteine (N) -0.4 -3.1 compare
carbon source Oleic (C) +0.4 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.9 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5 +2.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +2.1 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +2.3 compare
stress Growth with Chloride 200 mM; with MOPS +0.5 +2.7 compare
carbon source acetate (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.7 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.8 compare