Fitness data for PP_0226 in Pseudomonas putida KT2440

sulfur compound ABC transporter - permease subunit
SEED: Cystine ABC transporter, permease protein
KEGG: cystine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.8 -5.5 compare
nitrogen source 2,6-diaminopimelic (N) -1.1 -3.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -5.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -5.0 compare
nitrogen source L-Cysteine (N) -0.6 -5.0 compare
nitrogen source NAG (N); with MOPS -0.6 -1.7 compare
nitrogen source L-Cysteine (N) -0.6 -3.8 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.9 compare
phage P. putida Missley MOI 0.1 -0.5 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.5 compare
carbon source ferulate (C); with MOPS -0.4 -1.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.4 +1.9 compare
carbon source Beta-alanine (C) +0.4 +2.8 compare
carbon source butyrate (C) +0.4 +2.4 compare
carbon source 2,3-Butanediol (C) +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
pH pH 5 +0.5 +2.2 compare