Fitness data for PP_0223 in Pseudomonas putida KT2440

Monooxygenase, DszC family
SEED: Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -0.9 -2.8 compare
carbon source Valeric (C) -0.8 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.1 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.1 compare
carbon source carbon source Bisabolene 48.9 mM -0.5 -2.0 compare
stress Growth with Chloride 200 mM -0.5 -1.6 compare
carbon source Butanol (C) -0.5 -3.0 compare
pH pH 5 -0.5 -1.5 compare
carbon source L-Phenylalanine 5 mM (C) -0.4 -1.8 compare
carbon source 4-Aminobutyric 10 mM (C) -0.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.7 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.4 compare
carbon source Ethyl decanoate and D-Glucose (C)s +0.5 +2.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.9 compare
temperature shift Temperature shift 30_to_4 +0.5 +2.6 compare
carbon source D-Lysine 10 mM (C) +0.5 +2.5 compare
no stress control Growth with no stress +0.5 +2.4 compare