Fitness data for PP_0222 in Pseudomonas putida KT2440

Monooxygenase, DszA family
SEED: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -1.7 compare
phage P. putida PUT 7 MOI 1 -0.4 -1.6 compare
carbon source 1,3-Butandiol (C) -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.9 compare
nitrogen source nitrogen source nitrite 1mM -0.4 -1.5 compare
pH D-Glucose (C) pH 7 +0.4 +2.4 compare
phage P. putida South MOI 0.1 +0.4 +2.3 compare
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) +0.4 +2.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +1.6 compare
toxin pUC18_phdP1_pSU18T_docP1 +0.4 +2.5 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.5 compare
nitrogen source nitrogen source nitrite 1mM +0.4 +2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.4 +2.0 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.4 compare
pH pH 6 +0.4 +1.8 compare
carbon source 4-Aminobutyric 10 mM (C) +0.4 +2.0 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.1 compare
carbon source ferulate (C); with MOPS +0.5 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.6 +2.3 compare