Fitness data for PP_0198 in Pseudomonas putida KT2440

putative transporter
SEED: Homoserine/homoserine lactone efflux protein
KEGG: homoserine/homoserine lactone efflux protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.5 -3.5 compare
carbon source ferulate (C); with MOPS -1.4 -3.1 compare
nitrogen source nitrate (N) -1.2 -2.0 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -1.0 -3.1 compare
nitrogen source Ammonium chloride (N) -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.9 +1.7 compare
carbon source acetate (C) +0.9 +2.0 compare
stress Growth with Chloride 500 mM; with MOPS +0.9 +2.7 compare
nitrogen source Propandiamine (N) +0.9 +3.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.9 +2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM +1.0 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.0 +2.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM +1.0 +2.4 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +1.1 +2.8 compare
pH pH 8 +1.1 +2.4 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +1.2 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.0 compare
carbon source ferulate (C); with MOPS +1.4 +2.2 compare