Fitness data for PP_0197 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Small-conductance mechanosensitive channel

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
temperature shift Temperature shift 30_to_25; with MOPS -2.0 -2.6 compare
carbon source Myristic (C) -1.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.0 -2.1 compare
carbon source D-Glucose (C) -1.0 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -1.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.9 -1.7 compare
nitrogen source Ammonium chloride (N); with MOPS -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.4 compare
phage PUT8 MOI 0.1 -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.7 +2.1 compare
nitrogen source no extra (N); with MOPS +0.8 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +2.0 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.9 +3.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.9 +1.8 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.9 +1.5 compare
phage P. putida South MOI 10 +1.0 +3.0 compare
nitrogen source D-2-Aminobutyric (N) +1.1 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.2 +1.7 compare