Fitness data for PP_0191 in Pseudomonas putida KT2440

Transcriptional regulatory protein AlgQ
SEED: Regulator of sigma D
KEGG: regulator of sigma D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -4.0 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.2 -3.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.0 -2.3 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -1.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.5 -3.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.4 -2.8 compare
nitrogen source D-2-Aminobutyric (N) -1.4 -1.1 compare
nitrogen source nitrite (N) +1.4 +7.9 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Thr +1.4 +7.5 compare
carbon source 3-methyl-2-oxopentanoic (C) +1.4 +6.7 compare
carbon source 1,3-Hexanediol (C) +1.4 +5.2 compare
nitrogen source L-Methionine (N) +1.7 +4.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.7 +1.0 compare
carbon source 1,4-Butanediol (C) +1.9 +10.0 compare
carbon source 1,4-Butanediol (C) +2.0 +13.3 compare
carbon source L-Lysine 10 mM (C) +2.0 +8.8 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +2.6 +9.4 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +2.8 +10.0 compare