Fitness data for PP_0170 in Pseudomonas putida KT2440

ABC transporter, periplasmic binding protein
SEED: Taurine-binding periplasmic protein TauA
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.7 -2.5 compare
nitrogen source nitrate (N) -0.5 -2.1 compare
nitrogen source Urea (N); with MOPS -0.5 -2.1 compare
temperature Growth at 30C; with MOPS -0.4 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.9 compare
nitrogen source Ammonium chloride (N); with MOPS -0.4 -1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.3 -2.0 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +1.7 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.4 +1.7 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4 +1.7 compare
carbon source 5-Aminovaleric 10 mM (C) +0.4 +2.4 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +2.5 compare
stress Geraniol 1 vol% +0.6 +4.1 compare
pH pH 7 +0.6 +2.9 compare