Fitness data for PP_0163 in Pseudomonas putida KT2440

putative transcriptional regulator
SEED: Predicted regulator PutR for proline utilization, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0 -5.1 compare
nitrogen source L-Leucine (N) -0.9 -6.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9 -5.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.7 compare
nitrogen source Propandiamine (N) -0.7 -3.3 compare
nitrogen source L-Leucine (N) -0.7 -5.0 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +3.3 compare
carbon source 5-Hydroxydodecanoate (C) +0.7 +5.1 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7 +4.7 compare
phage P. putida PUT 7 MOI 1 +0.7 +4.1 compare
carbon source Levulinic Acid (C) +0.7 +4.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +5.0 compare
carbon source Levulinic Acid (C) +0.8 +6.5 compare
carbon source Delta-Nonalactone (C) +0.8 +5.4 compare
carbon source Ethyl decanoate (C) +0.9 +6.5 compare
carbon source Ethyl decanoate (C) +0.9 +7.2 compare
nitrogen source D-2-Aminobutyric (N) +1.1 +5.4 compare
phage P. putida Missley MOI 0.1 +1.2 +6.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +7.2 compare