Fitness data for PP_0161 in Pseudomonas putida KT2440

putative transmembrane sensor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature shift Temperature shift 30_to_25; with MOPS -0.9 -2.6 compare
pH Valerolactone (C) pH 6.5 -0.7 -2.8 compare
no stress control Growth with no stress -0.7 -2.4 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -2.1 compare
carbon source 1,3-Butandiol (C) -0.6 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.5 +3.0 compare
phage P. put PUT 10 MOI 0.1 +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +2.0 compare
carbon source Trisodium citrate 10 mM (C) +0.6 +3.0 compare
phage P. putida compost MOI 0.1 +0.6 +3.8 compare
phage P. putida Sci Big MOI 0.1 +0.6 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.7 +3.2 compare
phage P. putida Sci small MOI 0.1 +1.0 +3.3 compare
phage P. putida Missley MOI 0.1 +1.2 +5.0 compare
phage P. putida PUT 7 MOI 1 +1.3 +6.6 compare