Fitness data for PP_0142 in Pseudomonas putida KT2440

putative ABC transporter, permease protein
SEED: ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A
KEGG: putative ABC transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.0 compare
pH pH 5 -0.8 -2.4 compare
carbon source Hexanoic (C) -0.8 -2.9 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -2.6 compare
carbon source D-Glucose (C); with MOPS -0.7 -1.7 compare
carbon source carbon source Bisabolene 48.9 mM -0.7 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.4 compare
temperature Growth at 10C; with MOPS -0.6 -2.6 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
carbon source L-Glutamic (C) +0.8 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +1.8 compare
carbon source Tween 20 (C) +0.8 +2.1 compare
phage P. putida PUT 7 MOI 1 +0.9 +5.0 compare
phage P. putida Missley MOI 0.1 +1.0 +4.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +1.2 +4.1 compare