Fitness data for PP_0139 in Pseudomonas putida KT2440

putative Lipoprotein
SEED: Membrane lipoprotein lipid attachment site containing protein USSDB6D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 3-Hydroxydecanoic (C) -1.2 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.5 compare
pH Valerolactone (C) pH 6.5 -0.8 -2.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.8 -2.9 compare
nitrogen source nitrogen source nitrate 20mM -0.8 -2.5 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -2.3 compare
temperature shift Temperature shift 30_to_25 -0.7 -2.6 compare
carbon source Ferulic Acid (C) -0.7 -2.7 compare
carbon source D-Glucose (C) -0.7 -1.7 compare
pH D-Glucose (C) pH 7 -0.7 -3.4 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.7 -2.3 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.8 compare