Fitness data for PP_0123 in Pseudomonas putida KT2440

DNA polymerase I, 5
SEED: DNA polymerase I (EC 2.7.7.7)
KEGG: DNA polymerase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.1)


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group condition fitness t score  
carbon source 3-methyl-1-butanol (C) -3.4 -5.7 compare
carbon source 3-methyl-1-butanol (C) -3.1 -6.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.0 -8.7 compare
stress Formaldehyde 0.03125 vol% -2.8 -8.5 compare
carbon source BC Lignin Sorghum 20 vol% (C) -2.8 -5.3 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.8 -6.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.7 -7.8 compare
stress LB_noSalt with Chloride 1100 mM -2.6 -14.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5 -9.2 compare
stress LB_noSalt with Chloride 1100 mM -2.4 -12.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.3 -6.1 compare
carbon source Lignin Monomers (C) -2.1 -2.5 compare
phage P. put PUT 10 MOI 10 +2.1 +15.1 compare
phage P. put South MOI 1 +2.1 +14.8 compare
phage P. put South MOI 1 +2.2 +16.8 compare
phage P. putida PUT10 MOI 10 +2.2 +15.1 compare
phage P. putida South MOI 0.1 +2.4 +15.9 compare
phage P. putida South MOI 1 +2.4 +16.5 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +2.4 +7.2 compare
phage P. putida South MOI 0.1 +2.4 +16.4 compare