Fitness data for PP_0116 in Pseudomonas putida KT2440

putative lipoprotein
SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -2.6 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.1 -2.9 compare
phage P. put PUT 10 MOI 10 -0.9 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -1.9 compare
phage P. putida PUT10 MOI 1 -0.8 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.8 -1.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.8 -2.5 compare
phage P. putida PUT10 MOI 0.1 -0.8 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -1.6 compare
phage P. put PUT 10 MOI 0.1 -0.7 -2.9 compare
carbon source D-Glucose (C) -0.7 -1.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.6 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.8 +1.4 compare
carbon source Myristic (C) +0.8 +3.6 compare
carbon source Tween 20 (C) +0.9 +2.9 compare
carbon source Trisodium citrate (C) +0.9 +3.0 compare