Fitness data for PP_0115 in Pseudomonas putida KT2440

hydroperoxidase - self catalytic heme d synthase
SEED: Catalase (EC 1.11.1.6)
KEGG: catalase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Tween 20 (C) -0.6 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.6 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.9 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
temperature shift Temperature shift 30_to_25 -0.4 -1.8 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.3 -1.7 compare
pH Growth at pH7 and (C) D-Glucose -0.3 -1.5 compare
pH pH 5 -0.3 -1.5 compare
temperature Growth at 30C; with MOPS -0.3 -1.6 compare
carbon source ferulate (C); with MOPS +0.3 +1.3 compare
carbon source ferulate (C); with MOPS +0.3 +1.5 compare
phage P. putida PUT 7 MOI 1 +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.3 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4 +2.3 compare
phage P. putida Missley MOI 0.1 +0.4 +2.2 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare