Fitness data for PP_0076 in Pseudomonas putida KT2440

putative choline betaine-binding protein
SEED: L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
KEGG: glycine betaine/proline transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -3.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6 -2.4 compare
nitrogen source nitrate (N) -0.6 -1.9 compare
pH D-Glucose (C) pH 6 -0.5 -2.7 compare
nitrogen source nitrate (N) -0.5 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.0 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.4 -2.5 compare
nitrogen source Hippuric (N) -0.4 -2.6 compare
temperature shift Temperature shift 30_to_34 -0.4 -2.4 compare
carbon source D-Glucuronic gamma lactone (C) -0.4 -2.3 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.9 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.9 compare
carbon source Acetate Carbon Source (20mM) -0.4 -2.4 compare
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -0.4 -2.2 compare
carbon source 1-Pentanol (C) -0.4 -2.8 compare
carbon source DL-3-Hydroxybutyric (C) -0.4 -2.0 compare
stress Growth with Chloride 200 mM; with MOPS +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.6 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +2.8 compare