Fitness data for PP_0064 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Chaperone protein YscY (Yop proteins translocation protein Y)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source Myristic (C) -1.5 -2.5 compare
phage P. putida Sci Big MOI 0.1 -1.5 -2.8 compare
pH Growth at pH8 and (C) D-Glucose -1.3 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -1.2 -1.9 compare
toxin pUC18_phdP1_pSU18T_docP1 -1.0 -2.3 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -1.5 compare
carbon source 4-Aminobutyric 10 mM (C) -1.0 -2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -1.0 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -1.9 compare
carbon source Tween 20 (C) -0.9 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.4 compare
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.9 -3.1 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.0 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.8 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +1.3 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.0 +2.1 compare
nitrogen source NAG (N); with MOPS +1.0 +2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.2 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +2.0 compare