Fitness data for PP_0062 in Pseudomonas putida KT2440

3-methyl-adenine DNA glycosylase I
SEED: DNA-3-methyladenine glycosylase (EC 3.2.2.20)
KEGG: DNA-3-methyladenine glycosylase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source Trisodium citrate (C) -1.8 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -3.7 compare
carbon source butyrate (C) -0.9 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -3.2 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.8 -2.5 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -1.8 compare
carbon source carbon source Bisabolene 48.9 mM -0.8 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.8 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.8 -2.4 compare
temperature shift Temperature shift 10_to_30 -0.8 -1.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.7 -2.0 compare
phage P. putida South MOI 1 +0.7 +2.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.7 +1.7 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.8 +2.6 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.8 +2.2 compare
nitrogen source NAG (N); with MOPS +0.8 +1.6 compare
nitrogen source Ammonium chloride (N) +0.9 +2.2 compare
phage P. putida South MOI 0.1 +0.9 +2.7 compare