Fitness data for PP_0055 in Pseudomonas putida KT2440

transcriptional regulator
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source DL-3-Hydroxyisobutyric (C) -7.1 -4.9 compare
carbon source 3-Hydroxypropionate (C) -6.8 -12.3 compare
carbon source DL-3-Hydroxyisobutyric (C) -6.3 -8.7 compare
carbon source 3-Hydroxypropionate (C) -4.7 -7.9 compare
carbon source DL-3-Hydroxybutyric (C) -1.4 -5.1 compare
carbon source DL-3-Hydroxybutyric (C) -1.3 -5.6 compare
pH Growth at pH6 and (C) D-Glucose -1.2 -3.1 compare
nitrogen source NAG (N); with MOPS -1.2 -2.0 compare
carbon source ferulate (C); with MOPS -0.8 -2.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.8 -2.5 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.4 compare
pH Valerolactone (C) pH 6.5 -0.7 -3.2 compare
temperature shift Temperature shift 10_to_30 -0.6 -2.8 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.6 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
temperature shift Temperature shift 10_to_21 -0.5 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.7 compare
carbon source L-Alanine (C) +0.7 +3.0 compare
carbon source Valeric (C) +0.7 +3.6 compare