Fitness data for PP_0052 in Pseudomonas putida KT2440

beta-lactamase domain protein, putative hydrolase
SEED: FIG146518: Zn-dependent hydrolases, including glyoxylases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Tween 20 (C) -0.8 -2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.7 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.7 -2.0 compare
nitrogen source NAG (N); with MOPS -0.6 -1.2 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -1.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6 -2.6 compare
pH pH 7 -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.7 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5 -2.0 compare
nitrogen source L-Cysteine (N) -0.5 -3.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.8 compare
pH Growth at pH8 and (C) Trisodium citrate -0.5 -1.8 compare
nitrogen source L-Cysteine (N) -0.5 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.4 compare
carbon source Trisodium citrate 10 mM (C) -0.5 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.6 compare
carbon source Succinic Acid (C) +0.6 +3.7 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +2.7 compare
nitrogen source Urea (N) +0.7 +2.9 compare