Fitness data for PP_0040 in Pseudomonas putida KT2440

hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.5 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -1.5 -1.2 compare
carbon source 5-Aminovaleric 10 mM (C) -1.5 -1.9 compare
pH Growth at pH6 and (C) Trisodium citrate -1.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -2.2 compare
pH pH 9 -1.4 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.3 -2.3 compare
pH Valerolactone (C) pH 6.5 -1.3 -1.6 compare
carbon source ferulate (C); with MOPS -1.3 -2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.3 -1.5 compare
carbon source D-Glucose (C); with MOPS -1.2 -1.3 compare
carbon source Octanoic (C) -1.2 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.1 -2.6 compare
nitrogen source Propiolactam (N) -1.1 -2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.1 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.1 -1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +2.2 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +1.2 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.4 +1.6 compare