Fitness data for LRK53_RS12280 in Rhodanobacter sp000427505 FW510-R12

tRNA pseudouridine(13) synthase TruD
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
KEGG: tRNA pseudouridine synthase D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
biofilm assay; biofilm sample Biofilm; Day2; SGW; Manganese (II) chloride tetrahydrate 10mM -2.2 -2.8 compare
stress R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM -1.3 -3.2 compare
stress R2A_PIPES with Cobalt chloride 1024 uM -1.3 -2.7 compare
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -1.2 -1.6 compare
stress R2A_PIPES with Cobalt chloride 512 uM -1.1 -2.4 compare
stress R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM -1.0 -2.3 compare
biofilm assay; biofilm sample biofilm; Day1; NLDM; Aluminum chloride 1mM -1.0 -1.1 compare
no stress control R2A_PIPES no stress control -1.0 -2.3 compare
stress R2A_PIPES with Aluminum chloride 1.125 mM -1.0 -1.7 compare
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.9 -1.1 compare
pH pH4.3 -0.9 -1.9 compare
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.9 -1.5 compare
nutrient defined media with 20AA_mix -0.8 -1.6 compare
stress R2A_PIPES with Aluminum chloride 0.5625 mM -0.8 -1.7 compare
nldm low iron NLDM_defined low iron; midlog -0.7 -1.9 compare
pH pH5 -0.7 -1.9 compare
stress R2A_PIPES with Nickel (II) chloride 848 uM -0.7 -1.6 compare
pH pH4.5 -0.6 -1.6 compare
nutrient defined media with D-Glucose -0.6 -1.7 compare
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.7 +1.8 compare