Fitness data for PS417_05040 in Pseudomonas simiae WCS417

amino acid dehydrogenase
SEED: Leucine dehydrogenase (EC 1.4.1.9)
KEGG: leucine dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -2.1 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -1.1 -1.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -1.3 compare
lb LB_control -0.8 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.8 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.8 -1.8 compare
carbon source Trisodium citrate (C) -0.7 -2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X -0.7 -2.6 compare
phage P. simiae OR1 MOI 0.1 -0.7 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.7 -1.3 compare
phage Wcs_0.1 +0.7 +2.0 compare
root root sample 6; outgrowth in LB +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.0 compare
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.8 +3.8 compare
phage P. simiae OR Antrim MOI 1 +0.9 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.0 +2.2 compare
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +1.1 +2.8 compare