Fitness data for PS417_00495 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A
KEGG: putative ABC transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source 2'-Deoxyinosine 5 mM (C) -1.4 -1.9 compare
soil soil sample 5; outgrowth in LB -1.2 -2.2 compare
solid stress Fraxetin 3 mM; solid stress -1.1 -2.5 compare
stress methylglyoxal 0.032 vol% -1.1 -2.3 compare
phage P. simiae OR Antrim MOI 1 -1.1 -2.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.1 -2.7 compare
soil soil sample 6; outgrowth in LB -0.8 -1.7 compare
liquid stress Scopoletin 3 mM; liquid stress -0.8 -1.8 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.8 -1.1 compare
phage JP1 MOI 10 -0.7 -1.4 compare
soil soil sample 3; outgrowth in LB -0.7 -1.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.6 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.7 +0.9 compare
carbon source Carbon source L-Ornithine 10 mM +0.7 +2.5 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.7 +1.5 compare
carbon source Carbon source D-Mannitol 5 mM +0.7 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +1.5 compare
no phage control Time6-nophage +0.8 +2.6 compare
seeds Growth on radish seeds for 72 hours +1.0 +2.2 compare