Fitness data for PS417_04890 in Pseudomonas simiae WCS417

ATP-dependent RNA helicase RhlB
SEED: ATP-dependent RNA helicase RhlB
KEGG: ATP-dependent RNA helicase RhlB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Gentamicin 0.008 mg/ml -0.4 -2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.6 compare
phage JP1 MOI 10 -0.3 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.0 compare
stress Doxycycline hyclate 0.001 mg/ml -0.3 -2.1 compare
soil soil sample 5; outgrowth in LB -0.3 -1.5 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.3 +2.1 compare
carbon source Putrescine (C) +0.3 +2.6 compare
nitrogen source Urea (N) +0.3 +2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.9 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +2.0 compare
nitrogen source Uridine (N) +0.4 +3.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.5 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.5 +3.6 compare