Fitness data for PS417_04885 in Pseudomonas simiae WCS417

type IV secretion protein Rhs

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source L-Valine (C) -0.2 -1.5 compare
phage P. simiae OR Antrim MOI 10 +0.2 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.2 +1.5 compare
phage P. simiae OR Antrim MOI 0.1 +0.2 +1.5 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.2 +1.6 compare
phage P. simiae OR Antrim MOI 0.1 +0.2 +1.6 compare
stress LB_noSalt with Chloride 500 mM +0.2 +1.7 compare
root root sample 6; outgrowth in LB +0.2 +1.5 compare
phage P. simiae OR Antrim MOI 1 +0.2 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.2 +1.7 compare
solid stress Fraxetin 3 mM; solid stress +0.2 +1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.2 +1.8 compare
phage P. simiae ORA MOI 10 +0.2 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.8 compare
phage JP1 MOI 0.1 +0.2 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.9 compare
phage P. simiae OR Antrim MOI 10 +0.2 +1.9 compare
phage P. simiae Grant Run MOI 0.1 +0.2 +2.0 compare
stress LB_noSalt with Chloride 1100 mM +0.3 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.5 compare