Fitness data for PS417_00485 in Pseudomonas simiae WCS417

ABC transporter permease
SEED: ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C
KEGG: putative ABC transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
rhizosphere rhizosphere sample 1; outgrowth in LB -1.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.3 -1.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.1 -1.2 compare
soil soil sample 6; outgrowth in LB -1.1 -1.7 compare
carbon source D-Glucosamine Hydrochloride (C) -1.0 -2.2 compare
carbon source D-Trehalose (C) -1.0 -2.2 compare
stress Doxycycline hyclate 0.001 mg/ml -1.0 -1.8 compare
carbon source Uridine (C) -1.0 -3.2 compare
solid stress Fraxetin 3 mM; solid stress -0.9 -1.9 compare
liquid stress 80% Methanol 2 mM; liquid stress -0.8 -2.4 compare
soil soil sample 3; outgrowth in LB -0.8 -1.3 compare
solid stress 80% Methanol 3 mM; solid stress -0.8 -1.9 compare
carbon source D-Lactate (C) -0.8 -1.7 compare
carbon source L-Valine (C) -0.8 -1.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -0.9 compare
stress 6-methoxy-2(3H)-benzoxazolone 0.5 mM -0.8 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Phenylalanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.8 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +2.8 compare
phage P. simiae OR Antrim MOI 1 +1.1 +3.2 compare