Fitness data for PS417_04830 in Pseudomonas simiae WCS417

alginate biosynthesis protein
SEED: Alginate biosynthesis protein AlgK precursor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.9 compare
phage JP1 MOI 0.1 -0.4 -1.8 compare
carbon source D,L-Lactate (C) -0.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.1 compare
carbon source Carbon source L-Citrulline 5 mM -0.4 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.2 compare
soil soil sample 3; outgrowth in LB +0.4 +1.3 compare
stress Phosphomycin 0.002 mg/ml +0.4 +2.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.4 +1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.1 compare
agar plate interaction control Taped volatile agar plate with no fungus +0.5 +1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.7 compare
motility inner cut, LB soft agar motility assay +0.5 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.4 compare
stress Phosphomycin 0.003 mg/ml +0.6 +2.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +1.8 compare
stress Phosphomycin 0.001 mg/ml +0.7 +3.4 compare