Fitness data for PS417_04825 in Pseudomonas simiae WCS417

alginate regulatory protein
SEED: outer membrane protein AlgE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil soil sample 5; outgrowth in LB -0.7 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.6 -3.2 compare
stress Thallium(I) acetate 0.0625 mg/ml -0.6 -2.8 compare
soil soil sample 8; outgrowth in LB -0.5 -2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.0 compare
phage P. simiae ORA MOI 1 -0.5 -2.3 compare
phage P. simiae ORA MOI 0.1 -0.5 -1.7 compare
agar plate interaction control Taped volatile agar plate with no fungus -0.5 -1.5 compare
soil soil sample 3; outgrowth in LB -0.5 -2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -2.3 compare
phage P. simiae OR Antrim MOI 0.1 -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.3 compare
phage P. simiae OR Antrim MOI 1 -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.9 compare
liquid stress 80% Methanol 3 mM; liquid stress +0.5 +1.4 compare
stress Phosphomycin 0.001 mg/ml +0.5 +2.5 compare
carbon source L-Valine (C) +0.7 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +3.2 compare