Fitness data for PS417_04820 in Pseudomonas simiae WCS417

poly(beta-D-mannuronate) C5 epimerase
SEED: Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. simiae OR Antrim MOI 0.1 -0.8 -3.7 compare
phage P. simiae ORA MOI 0.1 -0.6 -2.4 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.6 compare
seeds Growth on radish seeds for 72 hours -0.5 -2.0 compare
phage P. simiae OR Antrim MOI 10 -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.6 compare
nophagecontrol TIme6-nophage -0.5 -2.8 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -1.8 compare
stress Gentamicin 0.008 mg/ml -0.5 -2.1 compare
phage P. simiae ORA MOI 0.1 -0.4 -2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.6 compare
carbon source RCH2_defined_glucose with MS_media 1x +0.4 +2.6 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.6 +2.2 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.9 compare
stress Phosphomycin 0.001 mg/ml +0.6 +3.4 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.6 +2.4 compare
stress Phosphomycin 0.003 mg/ml +0.7 +3.7 compare