Fitness data for PS417_04680 in Pseudomonas simiae WCS417

porin
SEED: Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress Doxycycline hyclate 0.001 mg/ml -0.4 -2.5 compare
phage JP1 MOI 10 -0.4 -2.4 compare
seeds Growth on radish seeds for 72 hours -0.3 -1.9 compare
phage Wcs_1 -0.3 -1.6 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.3 -1.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -2.0 compare
motility inner cut, LB soft agar motility assay +0.3 +1.9 compare
motility inner cut, LB soft agar motility assay +0.3 +1.8 compare
carbon source L-Valine (C) +0.3 +1.6 compare
seeds Growth on radish seeds for 72 hours +0.3 +1.5 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.5 +2.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +3.7 compare
stress Thallium(I) acetate 0.0625 mg/ml +0.6 +4.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.7 +5.2 compare
stress Paraquat dichloride 0.002 mg/ml +0.8 +6.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.9 +5.7 compare
stress Paraquat dichloride 0.008 mg/ml +1.7 +13.3 compare