Fitness data for PS417_04650 in Pseudomonas simiae WCS417

D-alanine--D-alanine ligase
SEED: D-alanine--D-alanine ligase (EC 6.3.2.4)
KEGG: D-alanine-D-alanine ligase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.8)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -3.4 -1.4 compare
motility inner cut, LB soft agar motility assay -3.4 -1.4 compare
motility inner cut, LB soft agar motility assay -3.3 -1.3 compare
no stress control on plate growth on LB_noSalt plate -3.2 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.2 -1.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.2 -1.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.2 -1.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.1 -1.2 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -3.0 -0.8 compare
motility outer cut, LB soft agar motility assay -2.9 -1.6 compare
stress Lomefloxacin 0.0001 mM -2.9 -2.2 compare
solid stress 80% Methanol 3 mM; solid stress +2.8 +2.0 compare
root root sample 6; outgrowth in LB +2.9 +3.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +3.8 +4.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +5.5 +4.3 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +6.1 +4.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +7.6 +4.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +8.2 +3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +8.3 +4.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +9.0 +4.3 compare