Fitness data for PS417_04540 in Pseudomonas simiae WCS417

long-chain fatty acid--CoA ligase
SEED: Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-)
KEGG: fatty-acyl-CoA synthase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress methylglyoxal 0.032 vol% -0.4 -2.1 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 -2.8 compare
phage JP1 MOI 0.1 -0.3 -2.2 compare
phage P. simiae OR1 MOI 0.1 -0.3 -2.0 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 -2.4 compare
carbon source octanoate (C) -0.3 -2.3 compare
phage P. simiae ORA MOI 10 -0.3 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.1 compare
carbon source L-Valine (C) -0.3 -1.5 compare
phage P. simiae Grant Run MOI 10 -0.3 -1.8 compare
supernatant control Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB -0.3 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -0.3 -1.9 compare
carbon source octanoate (C) -0.3 -1.8 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 +2.0 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.3 +2.2 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.3 +2.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.3 +1.6 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +2.3 compare