Fitness data for PS417_04220 in Pseudomonas simiae WCS417

4-carboxymuconolactone decarboxylase
SEED: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
KEGG: 4-carboxymuconolactone decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
carbon source L-Leucine (C) -4.7 -2.2 compare
rhizosphere rhizosphere sample 1; outgrowth in LB -2.5 -1.3 compare
root root sample 6; outgrowth in LB -2.4 -1.1 compare
carbon source L-Valine (C) -2.4 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.0 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.0 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -2.0 -1.5 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.9 -1.2 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -1.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.6 -1.2 compare
stress Doxycycline hyclate 0.001 mg/ml -1.6 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6 -1.1 compare
soil soil sample 6; outgrowth in LB -1.5 -1.0 compare
solid stress Fraxetin 3 mM; solid stress -1.5 -1.1 compare
stress R2A with Polymyxin B sulfate 0.003 mg/ml -1.5 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.5 -1.2 compare
soil soil sample 5; outgrowth in LB -1.4 -0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.5 compare
phage P. simiae Grant Run MOI 0.1 +1.6 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.2 +6.9 compare