Fitness data for PS417_04200 in Pseudomonas simiae WCS417

2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) (from data)
Original annotation: aldehyde dehydrogenase
SEED: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
KEGG: aldehyde dehydrogenase (NAD+)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Galacturonic Acid (C) -2.3 -8.3 compare
carbon source D-Galacturonic Acid (C) -2.2 -6.8 compare
seeds Growth on radish seeds for 72 hours -0.7 -2.7 compare
carbon source L-Valine (C) -0.5 -1.9 compare
liquid stress Fraxetin 2 mM; liquid stress -0.4 -2.4 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.4 -2.0 compare
solid stress 80% Methanol 0.5 mM; solid stress -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.4 +1.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 +0.4 +2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.5 compare
phage P. simiae OR1 MOI 0.1 +0.4 +0.9 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.4 +2.0 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.4 +1.4 compare
stress methylglyoxal 0.032 vol% +0.4 +1.7 compare
phage P. simiae OR Antrim MOI 1 +0.5 +2.2 compare
phage P. simiae OR Antrim MOI 0.1 +0.6 +2.2 compare
root root sample 6; outgrowth in LB +0.7 +2.7 compare