Fitness data for PS417_04180 in Pseudomonas simiae WCS417

GntR family transcriptional regulator
SEED: Predicted D-glucarate or D-galactorate regulator, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
carbon source 2-Deoxy-D-Ribose 10 mM (C) -4.8 -5.5 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) -3.8 -5.9 compare
carbon source Gly-Glu (C) -3.2 -7.0 compare
carbon source Putrescine (C) -2.9 -5.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.6 -4.2 compare
carbon source Putrescine (C) -2.6 -5.7 compare
carbon source 2'-Deoxyinosine 5 mM (C) -2.5 -4.1 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -3.5 compare
carbon source NAG (C) -2.3 -6.1 compare
carbon source Gly-Glu (C) -2.3 -5.4 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -2.3 -3.9 compare
carbon source 2-Deoxy-D-Ribose (C) -2.2 -3.3 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x -2.2 -3.0 compare
carbon source 2-Deoxy-D-Ribose (C) -2.1 -5.7 compare
carbon source 2-Deoxy-D-Ribose (C) -2.0 -3.8 compare
carbon source NAG (C) -2.0 -2.9 compare
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -1.9 -3.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.2 +5.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +2.6 +3.9 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +3.1 +5.0 compare