Fitness data for PS417_04130 in Pseudomonas simiae WCS417

AraC family transcriptional regulator
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.003 mg/ml -0.4 -2.0 compare
motility inner cut, LB soft agar motility assay -0.4 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.4 -2.4 compare
phage P. simiae ORA MOI 0.1 -0.4 -1.7 compare
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.3 -1.3 compare
carbon source octanoate (C) -0.3 -2.2 compare
phage P. simiae OR Antrim MOI 1 -0.3 -1.5 compare
soil soil sample 2; outgrowth in LB +0.4 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.9 compare
phage P. simiae ORA MOI 1 +0.4 +2.1 compare
soil soil sample 3; outgrowth in LB +0.4 +2.1 compare
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.8 compare
phage JP1 MOI 1 +0.4 +2.3 compare
rhizosphere rhizosphere sample 1; outgrowth in LB +0.5 +2.8 compare
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 +1.8 compare
stress methylglyoxal 0.032 vol% +0.5 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.4 compare
root root sample 6; outgrowth in LB +0.5 +2.6 compare
rhizosphere rhizosphere sample 8; outgrowth in LB +0.7 +3.6 compare